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  1. Hyak Julia programming

    Installing Julia ssh -X abc@mox.hyak.washington.edu srun -p build --time=2:00:00 --mem=100G --pty /bin/bash download julia tar.gz file from Julia Language web pages mkdir juliastuff cd julia stuff wget https://julialang.s3.amazonaws.com/bin/linux/x64/0.4/julia-0.4.6-linux-x86_64.tar.gz https://julialang.s3.amazonaws.
    Hyak User DocumentationAug 25, 2020
  2. Mox_healpix

    First install cfitsio as shown in below link: Hyak_cfitsio Below are the steps to install healpix on mox.hyak. Here xyz is your group name and abc is your userid. (1) srun -p build --time=2:00:00 --mem=100G --pty /bin/bash (2) mkdir /gscratch/xyz/abc/healpix_stuff (3) download the healpix source code tar.gz file t
    Hyak User DocumentationSep 15, 2019
  3. Hyak_Julia_programming

    Installing Julia ssh -X abc@hyak.washington.edu qsub -I -q build -V download julia tar.gz file from Julia Language web pages mkdir juliastuff cd julia stuff wget https://julialang.s3.amazonaws.com/bin/linux/x64/0.4/julia-0.4.6-linux-x86_64.tar.gz https://julialang.s3.amazonaws.com/bin/linux/x64/0.4/julia-0.4.6-l
    Hyak User DocumentationAug 31, 2016
  4. Re: Hyak RStudio

    NOTE: The first time you pass the -X argument to a SSH connection, you'll receive a message   /usr/bin/xauth:  file /usr/lusers/myuser/.Xauthority does not exist The -X argument should make the file for you automatically though. IOW, this message should only display the first time you enable remote X access.
    Hyak User Documentation / … / Hyak RStudioJan 24, 2017
  5. Mox_NGSolve

    Below abc is your hyak userid and xyz is your hyak group. If you want the GUI to show up on your laptop or desktop then use a linux laptop/desktop or a mac laptop/desktop with XQuartz installed. (1) srun -p xyz -A xyz --time=1:00:00 --mem=100G --pty /bin/bash (2) module load singularity gcc_8.2.1-ompi_3.1.4 (3) s
    Hyak User DocumentationSep 25, 2019
  6. Mox_OpenSees

    Building OpenSees Below are the steps to build OpenSees. Here xyz is your group name and abc is your hyak userid. (1) Run below command to get a build node: srun -p build --time=4:00:00 --mem=10G --pty /bin/bash (2) mkdir /gscratch/xyz/abc/opensees (3) cd /gscratch/xyz/abc/opensees (4) mkdir lib (5) mkdir bin (
    Hyak User DocumentationAug 18, 2019
  7. Mox_OpenSees_Tutorial

    This page is in a tutorial format for new Hyak users. It describes how to build and use OpenSees on mox.hyak. It is more detailed than the page Mox_OpenSees. Building OpenSees Below are the steps to build OpenSees. Here xyz is your group name and abc is your hyak userid. (0) ssh abc@mox.hyak.uw.edu (1) Run below co
    Hyak User DocumentationAug 28, 2019
  8. CSDE notes about using R on Hyak - Open MPI, building packages, repository issues

    In order to effectively use "R" on the Hyak cluster, a bit of setup first is recommended. First, get yourself connected to a Hyak Login node: ssh uwnetid@hyak.washington.edu then get a build node (this example will auto-logout after 2 hrs) qsub -q build -I -l walltime=2:00:00 you should see a prompt that looks
    Hyak User DocumentationSep 02, 2016
  9. Hyak_RStudio

    Hyak fully supports R, anything that you can do with R on your desktop computer can be done on hyak but on a much larger scale. However, since hyak is a large scale shared resource there are a few steps that you have to take before running R. Hyak is a Linux supercomputer. If you have not used the linux or UNIX or Mac
    Hyak User DocumentationAug 31, 2016
  10. Maintaining the Groups Service

    Overview These pages provide information necessary for the diagnosis and maintenance of the Groups 2.0 system. Audience This is an internal maintenance document for the edification of UWIT staff who maintain the service and for any others who are merely interested. You are expected to have a working knowledge
    IAMAug 17, 2020