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  1. Hyak Compile HDF5 Parallel

    Hyak Compiling HDF5 ParallelHyak Compiling HDF5 Parallel needs-review Migration of unmigrated content due to installation of a new plugin
    Hyak User DocumentationSep 01, 2016
  2. Hyak Compiling HDF5 Parallel

    Below you will find a sample session demonstrating how to use the Intel compilers to build a serial version of the HDF5 data format library with szlib compression support. This session can serve as a basic guide for compiling most software packages which use the autoconf (configure) and make tools as well. Change
    Hyak User DocumentationMay 31, 2018
  3. Hyak Compiling HDF5 Serial

    Below you will find a sample session demonstrating how to use the Intel compilers to build a serial version of the HDF5 data format library with szlib compression support. This session can serve as a basic guide for compiling most software packages which use the autoconf (configure) and make tools as well. Change
    Hyak User DocumentationMay 31, 2018
  4. WIKI for Hyak users

    , and similar communication tasks. There are also nodes that belong to the sponsoring institutions, and nodes for compiling and testing the programs. Any UW student … tasks are accomplished using Hyak. Compiling HDF5: compiling a non-parallel application with the Intel compilers Compiling an MPI application: compiling a test
    Hyak User DocumentationApr 05, 2021
  5. Hyak Software

    including the full GCC compiler suite , lapack, blas, valgrind, as well as many other libraries and utilities are bundled with Centos. Environment Modules Most … compilers and tools installation can be found in /sw/intel. Below you will find links to support and documentation, as well as basic information for setting up
    Hyak User DocumentationAug 25, 2020
  6. Mox_mpi

    Below xyz is your group name and abc is your userid. Compiling MPI program: See also Hyak Intel MPI Load one of below modules. Intel: Intel Mox … Compile your program using one of below compilers: intel C compiler is mpiicc intel C++ compiler is mpiicpc intel Fortran compiler is mpiifort gnu C
    Hyak User DocumentationNov 04, 2019
  7. Hyak netcdf

    See also Mox_building_netcdf Below are steps to compile a fortran program which uses netcdf with the intel compiler ifort. Load the appropriate netcdf+compiler module Use module avail to see a list of netcdf+compiler options. Below is one possible choice: module load netcdf_fortran_4.4.1-icc_15.0 Compiling using
    Hyak User DocumentationSep 13, 2019
  8. Mox_healpix

    for Fortran 90. (11) make  Compiling Fortran 90 program which uses healpix (a) cd (b) cd .healpix/3_50_Linux (c) source config (d) export CPATH=/gscratch/xyz … (configuration of packages can be done in any order): 2 enter C compiler you want to use (gcc): enter options for C compiler (-O2 -Wall): enter archive
    Hyak User DocumentationSep 15, 2019
  9. Hyak hdf5

    Below are steps to compile a program which uses hdf5. Load the appropriate hdf5+compiler module Use module avail to see a list of hdf5+compiler options. Below is one possible choice: module load hdf5_1.8.13-icc_15.0 Compiling using a Makefile If you are using a Makefile then inside your Makefile you should have
    Hyak User DocumentationSep 20, 2018
  10. Hyak cpp11

    command below enables g++ 4.8. This is required even for the Intel compiler since the Intel compiler uses the g++ standard library. For Non-MPI programs: Intel C++ compiler icpc: srun -p build --time=2:00:00 --mem=100G --pty /bin/bash source /opt/rh/devtoolset-2/enable module load icc_16.0.2 icpc program.cpp -std
    Hyak User DocumentationMay 31, 2018