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  1. Hyak Intel MPI

    See also below link: Mox_mpi Use "module avail" to decide the Intel compiler icc version and Intel MPI impi version that you want to use. Then load it using below command. module load icc_14.0.3-impi_4.1.3.049 Now you can use the intel compiler for MPI, mpiifort, mpiicc etc. However, it may be that your Makefiles
    Hyak User DocumentationJun 02, 2018
  2. Hyak CSDE R Open MPI

    CSDE notes about using R on Hyak - Open MPI, building packages, repository issuesCSDE notes about using R on Hyak - Open MPI, building packages, repository issues Migration of unmigrated content due to installation of a new plugin
    Hyak User DocumentationSep 01, 2016
  3. Hyak Open MPI

    See below link: Mox_mpi Debugging and Profiling Open-MPI .org maintains excellent instructions for debugging and profiling parallel applications: http://www.open-mpi.org/faq/?category=debugging http://www.open-mpi.org/faq/?category=debugging Keep in mind that Hyak does not provide Totalview or DDT, but other than
    Hyak User DocumentationJun 02, 2018
  4. CSDE notes about using R on Hyak - Open MPI, building packages, repository issues

    in your personal "R" library on Hyak. For me, this is in: /home/mbw/R/x86_64-unknown-linux-gnu-library/3.1 Some MPI and R links … it EXTREMELY useful to go through the example program here: Hyak_Open_MPI (yes, this is pure MPI, not "R" MPI, but it is a good getting started exercise
    Hyak User DocumentationSep 02, 2016
  5. Mox_mpi

    Below xyz is your group name and abc is your userid. Compiling MPI program: See also Hyak Intel MPI Load one of below modules. Intel: Intel Mox … command shows details of mpicc and the compiler used: mpicc -show Use below command to find location of MPI:  which mpirun Running MPI program: (More details
    Hyak User DocumentationNov 04, 2019
  6. Hyak_intel_mpi

    Use "module avail" to decide the Intel compiler icc version and Intel MPI impi version that you want to use. Then load it using below command. module load icc_14.0.3-impi_4.1.3.049 Now you can use the intel compiler for MPI, mpiifort, mpiicc etc. However, it may be that your Makefiles contains the non-Intel specfic
    Hyak User DocumentationAug 31, 2016
  7. Hyak Software

    with compiler environment Integrated Performance Primitives Loaded with compiler environment Math Kernel Library Loaded with compiler environment MPI … (http://www.roguewave.com/help-support/documentation/totalview http://www.roguewave.com/help-support/documentation/totalview). Hyak_totalview_debugger MPI Libraries Please keep in mind
    Hyak User DocumentationAug 25, 2020
  8. Scientific_Cloud_Coputing-JRehr-12feb09.pdf

    that make the EC2 appear like a local HPC cluster “HPC on a laptop” User’s workstation EC2_Clust_ scripts MPI Master startd MPI Slave startd MPI Slave startd -Start cluster -Configure nodes Current Scenario Step 1 EC2 Compute Instances User interacts with EC2_Clust_* scripts installed on own workstation. FEFF MPI AMI
  9. John Rehr.ppt

    with Gnu FORTRAN compilers (gfortran and g77) AWS tools for the EC2: AMI, API and S3 tools LAM 7.1.4 for parallel MPI codes Java Runtime Environment 6 Java … Current MPI Scenario EC2 Compute Instances User interacts with control workstation MPI Master startd MPI Slave startd MPI Slave startd Control Workstation ec2_clust_
  10. Hyak_RStudio

    Stackoverflow http://stackoverflow.com/questions/9700799/what-is-difference-between-r-base-and-r-recommended-packages Compiling MPI packages In order to compile MPI packages (like Rmpi https://cran.r-project.org/web/packages/Rmpi/index.html and pbdMPI https://cran.r-project.org/) you have to load MPI support module
    Hyak User DocumentationAug 31, 2016